Visualization

scOPE

single-cell Observation & Plotting Engine

An interactive data viewer built for exploration and figure generation at any scale. Overlay expression, compare datasets, and export publication-ready figures.

01

Visualization, Instantly

Browser based and lightning quick. Explore gene expression or a recent analysis in seconds, for data of any size, from any device.

02

Atlas-scale Rendering

2D and 3D rendering of millions of cells as UMAP, tSNE, PCA or custom embedding plots.

03

Overlay Gene Expression

Interrogate gene or feature expression with UMAP overlay, violin plot, dot plot, or co-expression plots. Set custom expression thresholds to dial in your analysis.

04

Fully Interactive and Customizable

Dynamically zoom or drag plots for immersive exploration. Set custom values for point size or text scale. Edit legend appearance, text and position. Choose from an extensive list of discreet or continuous colour schemes, dark modes and axes options.

05

Instant Quantification

Get empirical cluster, gene, and cell-level data with a live hover feed as your mouse over your plots. Toggle or modify your hover-insights as you see fit.

06

Parallel Analysis

Explore multiple datasets side-by-side with customizable workspace layouts.

07

Publication Ready Figures

Export plots in ultra high quality with custom sizing and DPI options.